Analysis Manager

GitHub Link to Code

Analysis manager for coordinating different types of analysis.

class mdxplain.analysis.manager.analysis_manager.AnalysisManager

Main manager for all analysis operations.

Provides access to different analysis types through properties. Currently supports feature analysis, with plans to extend to structure analysis, importance analysis, and more.

Examples

>>> # Feature analysis (services)
>>> pipeline.analysis.features.distances.mean()
>>> pipeline.analysis.features.contacts.std()

>>> # Future extensions
>>> pipeline.analysis.structure.rmsd(reference_traj=0, reference_frame=0)
>>> pipeline.analysis.structure.rmsd.median.to_reference()

__init__() → None

Initialize analysis manager.

Parameters

None: The initializer does not accept parameters.

Returns

None: The initializer does not return anything.

Notes

Pipeline data is injected automatically by AutoInjectProxy.

property features: FeatureAnalysisService

Get feature analysis service.

Parameters

None: The property does not accept parameters.

Returns

FeatureAnalysisService: Service providing access to feature analysis operations.

property structure: StructureAnalysisService

Get structure analysis service.

Parameters

None: The property does not accept parameters.

Returns

StructureAnalysisService: Service providing access to structure analysis operations.